BMC Bioinformatics

Table 6 \(\overline {AUPRC}\) values for HMC-LMLP variations and NHMC

From: Reduction strategies for hierarchical multi-label classification in protein function prediction

	HMC-LMLP				NHMC (DIP)		NHMC (Bio-GRID)
Dataset	Labels	Predicted	True	NoLabels	α=0.5	α=0.0	α=0.5	α=0.0
\(\overline {AUPRC}\) values
Cellcycle	0.022	0.035	0.031	0.033	0.030	0.037	0.020	0.029
Church	0.019	0.023	0.022	0.022	0.020	0.020	0.020	0.020
Derisi	0.020	0.027	0.024	0.025	0.028	0.025	0.020	0.026
Eisen	0.027	0.048	0.041	0.043	0.042	0.025	0.024	0.037
Gasch1	0.024	0.046	0.041	0.045	0.040	0.032	0.033	0.036
Gasch2	0.022	0.038	0.031	0.033	0.034	0.027	0.025	0.028
Pheno	0.019	0.023	0.021	0.022	0.035	0.028	0.028	0.028
Spo	0.021	0.027	0.026	0.026	0.029	0.025	0.020	0.027
Expr	0.021	0.053	0.051	0.051	0.030	0.025	0.020	0.028
Seq	0.019	0.041	0.041	0.041	0.054	0.053	0.056	0.062

Best results are highlighted in bold face

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ISSN: 1471-2105

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