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Table 1 Example of an alignment of amino acid sequences of protein descriptors from the same group (the group founder is descriptor d1p1da2_A_206_LEU, see also Fig. Sf2 in Additional file 1)

From: Structural alignment of protein descriptors – a combinatorial model

Descriptor name Segment 1 Segment 2 Segment 3 Segment 4 Segment 5 Segment 6
d1p1da2_A_206_LEU FHVKLPK LGITI DPLVISD SVAHRTGTLEL DKLLAIDN QILQQCEDLVKLKIRK
d1q3oa__A_679_VAL KTVLLQK FGFVL ..QYLES GVAWR.AGLRM DFLIEVNG NMIRQ..NTLMVKVVM
d1y7na1_A_84_MET TTVLIRR LGFSV ..GIICS GIAER.GGVRV HRIIEING HILSN..GEIHMKTMP
d1x6da1_A_98_ILE HVTILHK AGLGF ..ITVHR GLASQ.GTIQK NEVLSING RQARE..RQAVIVTRK
d1v62a__A_96_LEU ..VEIVK LGISL ..ITIDR SVVDR.GALHP DHILSIDG KLLASISEKVRLEILP
d1w9ea1_A_188_MET REVILCK LRLKS ..IFVQL SPASL.VGLRF DQVLQING KVLKQ..EKITMTIRD
d2cssa1_A_110_ILE GRVILNK LKVVG ..AFITK SLADVVGHLRA DEVLEWNG NIILE..PQVEIIVSR
d1uf1a__A_98_LEU KKVNLVL LTIRG ..IYITG SEAEG.SGLKV DQILEVNG RLLKS..RHLILTVKD
  1. Character “.” means that there is no structural mapping for a particular residue between the founder and the group member