TY - JOUR AU - Khomtchouk, Bohdan B. AU - Hennessy, James R. AU - Wahlestedt, Claes PY - 2016 DA - 2016/09/22 TI - MicroScope: ChIP-seq and RNA-seq software analysis suite for gene expression heatmaps JO - BMC Bioinformatics SP - 390 VL - 17 IS - 1 AB - Heatmaps are an indispensible visualization tool for examining large-scale snapshots of genomic activity across various types of next-generation sequencing datasets. However, traditional heatmap software do not typically offer multi-scale insight across multiple layers of genomic analysis (e.g., differential expression analysis, principal component analysis, gene ontology analysis, and network analysis) or multiple types of next-generation sequencing datasets (e.g., ChIP-seq and RNA-seq). As such, it is natural to want to interact with a heatmap’s contents using an extensive set of integrated analysis tools applicable to a broad array of genomic data types. SN - 1471-2105 UR - https://doi.org/10.1186/s12859-016-1260-x DO - 10.1186/s12859-016-1260-x ID - Khomtchouk2016 ER -