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Table 2 Probabilities of 15 rooted gene trees given the phylogenetic network ψ of Fig. 2 b (w=0) as x→∞

From: In the light of deep coalescence: revisiting trees within networks

Gene Tree T i

P(T i |ψ,y,γ)

T 1=(((b,c),a),d)

\(\gamma -(\gamma -\frac {\gamma ^{2}}{3})e^{-y}\)

T 2=(((b,c),d),a)

\((1-\gamma)-(-\frac {\gamma ^{2}}{3}-\frac {\gamma }{3}+\frac {2}{3})e^{-y}\)

T 3=((a,b),(c,d))

γ(1−γ)e −y

T 4=((a,c),(b,d))

γ(1−γ)e −y

T 5=(((a,b),c),d)

\(\frac {\gamma ^{2}}{3}e^{-y}\)

T 6=(((a,c),b),d)

\(\frac {\gamma ^{2}}{3}e^{-y}\)

T 7=(a,(b,(c,d)))

\(\frac {(1-\gamma)^{2}}{3}e^{-y}\)

T 8=(((b,d),c),a)

\(\frac {(1-\gamma)^{2}}{3}e^{-y}\)

T 9=((a,d),(b,c))

0

T 10=(((a,b),d),c)

0

T 11=(b,(a,(c,d)))

0

T 12=(((a,d),b),c)

0

T 13=(((b,d),a),c)

0

T 14=(((a,c),d),b)

0

T 15=(((a,d),c),b)

0