From: SAMSA: a comprehensive metatranscriptome analysis pipeline
Phylum | 4012, P4 | 4012, P1 | 4015, P4 | 4015, P1 | % depleted |
---|---|---|---|---|---|
Gemmatimonadetes | 3 | 1 | 28 | 5 | 74.40 |
Spirochaetes | 3 | 4 | 14 | 55 | 163.10 |
Nitrospirae | 4 | 1 | 22 | 0 | 87.50 |
Fusobacteria | 5 | 5 | 24 | 9 | 31.25 |
Fibrobacteres | 6 | 0 | 21 | 0 | 100.00 |
Synergistetes | 6 | 5 | 14 | 2 | 51.19 |
Thermi | 6 | 1 | 11 | 1 | 87.12 |
Chlorobi | 6 | 1 | 34 | 0 | 91.67 |
Chloroflexi | 7 | 6 | 29 | 2 | 53.69 |
Caldiserica | 8 | 0 | 64 | 0 | 100.00 |
Caldithrix | 11 | 0 | 70 | 2 | 98.57 |
Tenericutes | 67 | 6 | 411 | 28 | 92.12 |
Chlamydiae | 74 | 1 | 410 | 15 | 97.50 |
Acidobacteria | 94 | 5 | 453 | 7 | 96.57 |
Euryarchaeota | 175 | 15 | 942 | 693 | 58.93 |
Parvarchaeota | 241 | 8 | 1298 | 22 | 97.49 |
Cyanobacteria | 262 | 210 | 974 | 59 | 56.89 |
Planctomycetes | 303 | 7 | 2019 | 23 | 98.28 |
Crenarchaeota | 514 | 183 | 2474 | 106 | 80.06 |
Lentisphaerae | 1045 | 19 | 6324 | 151 | 97.90 |
Verrucomicrobia | 1107 | 29 | 6679 | 117 | 97.81 |
Actinobacteria | 2739 | 5432 | 8394 | 5326 | 30.89 |
Proteobacteria | 43585 | 3780 | 61436 | 2612 | 93.54 |
Bacteroidetes | 486595 | 218584 | 1163164 | 98778 | 73.29 |
Firmicutes | 939246 | 127130 | 2178859 | 38923 | 92.34 |
TOTALS | 1476112 | 355433 | 3434266 | 146948 | 75.98 |