Table 3 Analysis of bacterial RNAs [3]
MEASURE | GC 5 % | Exact GC | No GC | WT |
|---|---|---|---|---|
BP DIST TARGET | 0.08 ±0.04 | 0.08 ±0.04 | 0.14 ±0.06 | 0 ±0 |
ENERGY MFE | –0.44 ±0.1 | –0.44 ±0.1 | –0.63 ±0.14 | –0.29 ±0.1 |
ENERGY TARGET | –0.39 ±0.12 | –0.39 ±0.12 | –0.54 ±0.16 | –0.29 ±0.1 |
ENSEMBLE DEFECT | 0.16 ±0.08 | 0.16 ±0.08 | 0.23 ±0.1 | 0.14 ±0.09 |
EXP BP DIST | 0.09 ±0.04 | 0.09 ±0.04 | 0.15 ±0.06 | 0.09 ±0.06 |
PROP NAT CONTACT | 0.89 ±0.09 | 0.89 ±0.09 | 0.8 ±0.12 | 0.83 ±0.15 |
POS ENTROPY | 0.19 ±0.08 | 0.19 ±0.08 | 0.23 ±0.09 | 0.35 ±0.18 |
GC CONTENT | 48.33 ±7.02 | 48.34 ±7.02 | 74.75 ±5.55 | 48.34 ±7.02 |
LN DUAL PROB | –94.59 ±27.22 | –94.54 ±27.19 | –66.37 ±16.96 | –117.22 ±33.37 |
LN PROB | –10.12 ±4.04 | –10.09 ±4.03 | –13.71 ±5.16 | –2.34 ±0.95 |
MH STR DIV | 0.1 ±0.04 | 0.1 ±0.04 | 0.13 ±0.05 | 0.18 ±0.09 |
VIENNA STR DIV | 0.06 ±0.03 | 0.06 ±0.03 | 0.09 ±0.03 | 0.11 ±0.06 |