Fig. 2

Snapshots from the HMMRBP database. Different features of the database have been shown here. a Database browser. The users can browse through the HMMRBP database for details pertaining to each family, protein or RNA and their related information, based on keyword search or RNA motif search in the ‘search’ tool box. The database can also be browsed through a list of families from the ‘browse’ button. b List of families in the database. A list of all the 444 structural families and 746 Pfam families that are present in this database, along with their associated details have been provided. This list can be sorted in ascending or descending order based on the family id, name, type and the number of members. c Details of each family. Features pertaining to each family (hierarchy of the family, cognate RNAs, GO functions, superposed structures and structural phylogeny of all the members, MSSA, RBRs and NUCPLOT for each member) can be visualised in each family-specific page. Residues that are 100 % conserved among all the member PDB chains in the family (ACRs) are highlighted in yellow in the alignment