Table 3 Equivalences between the gene areas defined by RGmatch and HOMER
From: RGmatch: matching genomic regions to proximal genes in omics data integration
RGmatch | HOMER |
|---|---|
INTRON | Intron |
UPSTREAM | Intergenic |
DOWNSTREAM | TTS; Intergenic |
GENE_BODY | exon; 3′ UTR; 5′ UTR |
TSS | promoter-TSS |
1st_EXON | exon; promoter-TSS; 5′ UTR; 3′ UTR |