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Table 7 Overlap of CNVs detected by PSE-HMM against DGV is given by calls and bases

From: PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities

 

Number of CNV calls

Overlap against DGV (by calls)

Overlap against DGV (by bases)

Deletion

5,447

58 %

64 %

Tandem duplication

75

83 %

75 %

Total

5,522

58 %

70 %