Table 6 Leukemia gene expression results
From: Unsupervised gene set testing based on random matrix theory
Gene set | Direction | GSE | Unweighted | MLRT | SGSE | TWT | MPDT |
|---|---|---|---|---|---|---|---|
p-value | q-value | wFDR | wFDR | wFDR | wFDR | ||
*GSE10325_{B}CELL_{V}S_{M}YELOID_{U}P (124) | ALL | 0.00225 | 0.999 | 0.655 | 0.711 | 0.0969 | 1 |
*GSE29618_{B}CELL_{V}S_{M}ONOCYTE_{D}AY … (130) | ALL | 0.00302 | 0.999 | 0.655 | 0.711 | 0.0969 | 1 |
GSE29618_{B}CELL_{V}S_{M}DC_{D}AY7_{F}LU … (126) | ALL | 0.0046 | 0.999 | 0.655 | 0.729 | 0.574 | 1 |
GSE10325_{C}D4_{T}CELL_{V}S_{B}CELL_{D}N (132) | ALL | 0.005 | 0.999 | 1 | 0.711 | 0.574 | 1 |
*GSE10325_{L}UPUS_{B}CELL_{V}S_{L}UPUS_ … (123) | ALL | 0.00563 | 0.999 | 0.431 | 0.711 | 0.12 | 1 |
GSE29618_{B}CELL_{V}S_{M}DC_{U}P (133) | ALL | 0.00719 | 0.999 | 0.655 | 0.955 | 0.574 | 1 |
GSE29618_{B}CELL_{V}S_{M}ONOCYTE_{U}P (108) | ALL | 0.00776 | 0.999 | 0.655 | 0.711 | 0.574 | 1 |
GSE29618_{B}CELL_{V}S_{M}ONOCYTE_{D}AY … (143) | AML | 0.0137 | 0.999 | 0.655 | 0.711 | 0.574 | 1 |
GSE24634_{T}REG_{V}S_{T}CONV_{P}OST_{D}A … (123) | AML | 0.0162 | 0.999 | 1 | 0.711 | 1 | 1 |
GSE6269_{H}EALTHY_{V}S_{S}TREP_{A}UREU … (133) | AML | 0.0168 | 0.999 | 0.655 | 0.711 | 0.574 | 1 |
GSE29618_{B}CELL_{V}S_{M}DC_{D}AY7_{F}LU … (126) | AML | 0.0171 | 0.999 | 0.655 | 0.711 | 1 | 1 |
GSE6269_{H}EALTHY_{V}S_{S}TREP_{P}NEUM … (134) | AML | 0.0174 | 0.999 | 0.655 | 0.711 | 0.742 | 1 |
GSE15767_{M}ED_{V}S_{S}CS_{M}AC_{L}N_{U}P (117) | AML | 0.0229 | 0.999 | 1 | 0.711 | 1 | 1 |
GSE6269_{E}_COLI_{V}S_{S}TREP_{A}UREUS … (130) | AML | 0.0245 | 0.999 | 1 | 0.711 | 1 | 1 |
GSE22886_{N}AIVE_{C}D8_{T}CELL_{V}S_{N}E … (122) | AML | 0.0295 | 0.999 | 1 | 0.729 | 1 | 1 |
GSE6269_{F}LU_{V}S_{E}_COLI_{I}NF_{P}BMC … (128) | AML | 0.0306 | 0.999 | 1 | 0.711 | 1 | 1 |
GSE29618_{M}ONOCYTE_{V}S_{P}DC_{U}P (126) | AML | 0.0333 | 0.999 | 0.659 | 0.711 | 0.706 | 1 |
GSE6269_{H}EALTHY_{V}S_{S}TREP_{A}UREU … (109) | ALL | 0.0353 | 0.999 | 0.906 | 0.907 | 0.592 | 1 |
GSE3982_{M}EMORY_{C}D4_{T}CELL_{V}S_{B}C … (73) | ALL | 0.0361 | 0.999 | 1 | 0.995 | 1 | 1 |
GSE360_{C}TRL_{V}S_{M}_TUBERCULOSIS_ … (71) | AML | 0.0364 | 0.999 | 1 | 0.711 | 1 | 1 |
GSE11057_{E}FF_{M}EM_{V}S_{C}ENT_{M}EM_{C} … (85) | AML | 0.0381 | 0.999 | 1 | 0.729 | 1 | 1 |
GSE10325_{L}UPUS_{B}CELL_{V}S_{L}UPUS_ … (88) | AML | 0.0384 | 0.999 | 0.655 | 0.711 | 0.998 | 1 |
GSE360_{C}TRL_{V}S_{L}_DONOVANI_{D}C_{D} … (75) | AML | 0.0403 | 0.999 | 1 | 0.729 | 1 | 1 |
GSE22886_{N}AIVE_{C}D4_{T}CELL_{V}S_{N}E … (92) | AML | 0.0403 | 0.999 | 1 | 0.758 | 1 | 1 |
GSE3982_{C}TRL_{V}S_{P}MA_{S}TIM_{E}OSIN … (93) | AML | 0.0427 | 0.999 | 1 | 0.711 | 1 | 1 |