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Table 1 Results of Mascot identification of MS spectra against the annotated genomes of the species

From: Large scale analysis of amino acid substitutions in bacterial proteomics

Species Strain Genome NCBI Total # of # of identified # of identified Mascot threshold Decoy threshold
   accession spectra spectra unique peptides score score
H. pylori A45 AMYU00000000 74800 15108 6606 8 8
H. pylori 26695 NC_018939 71801 14732 6737 8 8
H. pylori E48 AYHQ00000000 58704 14655 6506 8 8
H. pylori J99 NC_000921 68739 15279 6374 8 8
H. pylori H13-1 AYUH00000000 64585 17554 7341 8 8
N. gonorrhoeae i19.05 JFBA00000000 72851 24964 6374 9 6
N. gonorrhoeae n01.08 JIBZ00000000 83672 32005 6761 9 6
N. gonorrhoeae FA1090 NC_002946.2 44803 11891 5072 9 10