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Table 2 Size of database and index files in gigabytes (GB)

From: muBLASTP: database-indexed protein sequence search on multicore CPUs

 

uniprot_sprot

env_nr

nr

Database

0.25

1.89

52.4

Index w/ neighbors

18.1

116.6

N/A

Index w/o neighbors

0.76

5.82

122.3

Compressed index

0.51

3.97

83.1

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BMC Bioinformatics

ISSN: 1471-2105

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