From: muBLASTP: database-indexed protein sequence search on multicore CPUs
Query length | Haswell platform | Â | Nehalem platform | Â | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
 | uniprot_sprot | env_nr | nr | uniprot_sprot | env_nr | nr | ||||||
 | Aver | SD | Aver | SD | Aver | SD | Aver | SD | Aver | SD | Aver | SD |
100 | 4.56 | 0.002 | 2.62 | 0.008 | 1.81 | 0.010 | 3.85 | 0.001 | 2.2 | 0.002 | 1.56 | 0.001 |
500 | 2.45 | 0.005 | 1.41 | 0.002 | 1.35 | 0.002 | 1.82 | 0.002 | 1.34 | 0.001 | 1.17 | 0.002 |
1000 | 2.74 | 0.003 | 1.32 | 0.003 | 1.19 | 0.001 | 1.71 | 0.002 | 1.13 | 0.001 | 1.05 | 0.002 |
Mixed | 3.28 | 0.005 | 1.38 | 0.002 | 1.47 | 0.002 | 2.61 | 0.001 | 1.61 | 0.002 | 1.24 | 0.002 |