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Table 5 Consistency of VJ annotations to the SRR9346(68-79;86-91) data

From: TRIg: a robust alignment pipeline for non-regular T-cell receptor and immunoglobulin sequences

TRIg v.s.

Identical

Extra

Missing

Distinct

Non-VJ

IgBLAST

46,496

6601

5799

28,144

18,740

IMGT

44,684

2736

6328

11,057

14

  1. Note that IgBLAST or IMGT gave an annotation not present in the reference set of TRIg to 8.9 % of the reads, resulting in non-identical annotations
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BMC Bioinformatics

ISSN: 1471-2105

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