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Table 3 Results from running LSCplus, LSC and PBcR

From: LSCplus: a fast solution for improving long read accuracy by short read alignment

  LSCplus LSC (v1_beta) LSC (v2) PacBioToCA
Output lrLR number 155,399 155,398 159,168 109,078
Mapped lrLR numbera 155,305 155,286 159,000 108,170
Average length of lrLRs 832.21 bp 831.30 bp 731.09 bp 101.28 bp
Time consumed   1 h 52 min 6 h 52 min 42 h 35 min 58 h 57 min
Sequence identity SI ≥ 0.9 73.63 % (114,351) 71.78 % (111,464) 74.62 % (118,654) 86.94 % (94,043)
SI ≥ 0.8 78.93 % (122,582) 78.59 % (122,039) 80.13 % (127,410) 92.49 % (100,047)
SI ≥ 0.7 81.22 % (126,138) 81.17 % (126,045) 82.37 % (130,973) 95.68 % (103,497)
  1. aNumber of lrLRs that mapped to hg38
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