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Table 4 Running time of the CMIP programs in pineapple GRNs reconstruction

From: CMIP: a software package capable of reconstructing genome-wide regulatory networks using gene expression data

Programs/time (seconds)

Leaf base network

Leaf tip network

CMIPa

1828

2277

CMIPb

2026

2733

  1. aGPU version program, b CPU version program
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BMC Bioinformatics

ISSN: 1471-2105

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