Table 1 Datasets used for comparing preprocessing methods
From: GFS: fuzzy preprocessing for effective gene expression analysis
Disease type | Source | Affy GeneChip | Dataset composition |
|---|---|---|---|
DMD | Haslett et al. [10] | HG-U95Av2 | 12 DMD, 12 controls |
Pescatori et al. [11] | HG-U133A | 22 DMD, 14 controls | |
Leukemia | Golub et al. [13] | HU-6800 | 47 ALL, 25 AML |
Armstrong et al. [12] | HG-U95Av2 | 24 ALL, 24 AML | |
ALL | Yeoh et al. [14] | HG-U95Av2 | 15 BCR-ABL, 27 E2A-PBX1 |
Ross et al. [15] | HG-U133A | 15 BCR-ABL, 18 E2A-PBX1 | |
ALL | Yeoh et al. [14] | HG-U95Av2 | 6 Normal, 26 TEL-AML1, |
22 Hyperdip >50, 15 T-ALL, | |||
10 Pseudodip, 6 BCR-ABL, | |||
7 MLL, 8 Hyperdip47-50 | |||
9 E2A-PBX1, 3 Hypodip |