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Fig. 4 | BMC Bioinformatics

Fig. 4

From: A fast read alignment method based on seed-and-vote for next generation sequencing

Fig. 4

a A block having 2 mismatches. In this situation, the first seed of the read voting to the block starts at the first base pair. Since the gap between two neighbor seeds is 8, the seeds start at the 1st, 9th, 17th, 25th, 33rd, 41st, 49th, 57th, 65th, 73rd, 81st, 89th, 97th, 105th, 113rd base pair voting to the block, and totals 15 votes. b A block having 0 mismatches. In this situation, the first seed of the read voting to the block starts at the 8th base pair, and the 8th, 16th, 24th, 32nd, 40th, 48th, 56th, 64th, 72nd, 80th, 88th, 96th, 104th, 112nd base pair voting to the block, totaling 14 votes. Here, green color stands for a match and red color for a mismatch

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