Table 4 Time cost on real data
From: A fast read alignment method based on seed-and-vote for next generation sequencing
Tool | Time1(m) | Time2(m) | Time3(m) | Time4(m) | Time5(m) |
|---|---|---|---|---|---|
BWA-MEM | 4443 | 7783 | 8311 | 8056 | 9181 |
Subread | 8894 | - | - | - | - |
FSVA | 812 | 1184 | 1385 | 1335 | 1541 |
Bowtie2 | 5191 | 6384 | 6998 | 6694 | 7781 |