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Table 2 The rare driver genes in HNSC

From: LNDriver: identifying driver genes by integrating mutation and expression data based on gene-gene interaction network

Rank

Gene

Cases with mutations

Mutation frequency (%)

p-value

CGC gene

14

AKT1

10

1.996008

0.011832

YES

15

RB1

9

1.796407

0.012938

YES

18

CALM1

7

1.397206

0.016769

NO

22

MAPK1

4

0.798403

0.019237

NO

23

PLCG1

5

0.998004

0.030388

YES

24

ZBTB16

8

1.596806

0.032729

YES

30

SETDB1

3

0.598802

0.044476

NO

32

PTK2

4

0.798403

0.048264

NO