Table 2 Predictive performance of sequence features for the four benchmark dataset
Features | DT | LR | ANN | |||
|---|---|---|---|---|---|---|
Acc.(%) | AUC | Acc.(%) | AUC | Acc.(%) | AUC | |
746 Dataset | ||||||
AAC | 83.7 | 0.897 | 86.4 | 0.938 | 81.0 | 0.935 |
DipC | 75.6 | 0.793 | 86.4 | 0.865 | 91.9 | 0.974 |
PseAAC | 78.3 | 0.787 | 86.4 | 0.938 | 81.0 | 0.885 |
Seq_All | 78.3 | 0.831 | 86.4 | 0.847 | 91.9 | 0.979 * |
1625 Dataset | ||||||
AAC | 91.4 | 0.908 | 84.1 | 0.904 | 91.4 | 0.952 |
DipC | 92.6 | 0.861 | 96.3 | 0.972 | 98.7 | 0.987 |
PseAAC | 90.2 | 0.822 | 87.8 | 0.921 | 87.8 | 0.945 |
Seq_All | 92.6 | 0.882 | 96.3 | 0.958 | 98.7 | 0.984 |
Schilling Dataset | ||||||
AAC | 87.7 | 0.664 | 86.5 | 0.856 | 88.9 | 0.858 |
DipC | 87.7 | 0.526 | 87.1 | 0.806 | 89.5 | 0.790 |
PseAAC | 87.1 | 0.500 | 86.5 | 0.864 | 88.3 | 0.858 |
Seq_All | 87.7 | 0.611 | 87.7 | 0.802 | 87.1 | 0.821 |
Impens Dataset | ||||||
AAC | 85.1 | 0.500 | 80.8 | 0.857 | 89.3 | 0.886 |
DipC | 85.1 | 0.500 | 82.9 | 0.579 | 93.6 | 0.893 |
PseAAC | 87.2 | 0.721 | 78.7 | 0.814 | 87.2 | 0.868 |
Seq_All | 87.2 | 0.802 | 85.1 | 0.696 | 89.3 | 0.875 |