Table 3 Comparison of the methods for pre-miRNA ab initio prediction using sequence HAD. The results of five distinct combinations of discriminant probabilities for the three respective stages are shown in parenthesis for Mirnacle

Mirnacle (0.3,0.3,0.7)

97

81.51

88.91

14:58

Mirnacle (0.4,0.4,0.7)

86

85.15

85.57

07:31

Mirnacle (0.5,0.5,0.7)

65

86.76

75.09

03:24

Mirnacle (0.6,0.6,0.7)

55

94.83

72.21

02:05

Mirnacle (0.8,0.8,0.7)

23

95.83

46.94

01:20

TVM

97

39.34

61.77

-

miRNAFold

97

19.17

43.12

00:0.84

miRPara

97

9.70

30.67

05:24

CID-miRNA

97

11.72

33.71

90:49

VMir

28

1.32

6.07

02:32