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Table 4 Comparison of the methods for pre-miRNA ab initio prediction using sequence HSD (A) and MMD (B). The results of Mirnacle are with thresholds (0.3, 0.3, 0.7) for the three stages, respectively

From: Mirnacle: machine learning with SMOTE and random forest for improving selectivity in pre-miRNA ab initio prediction

Method Sensitivity Selectivity GM
(A) Results for the Homo sapiens sequence (HSD):
Mirnacle 100 29.52 54.33
TVM 100 1.43 11.95
miRNAFold 100 0.89 9.43
miRPara 98 0.93 9.54
CID-miRNA 38 0.69 5.12
VMir 100 0.56 7.48
(B) Results for the Mus musculus sequence (MMD):
Mirnacle 98.61 47.33 68.31
TVM 100 4.13 20.32
miRNAFold 98.59 7.71 27.57
miRPara 98.59 5.34 22.94
CID-miRNA 29.58 0.82 4.92
VMir 88.73 2.93 16.12