Skip to main content
Fig. 4 | BMC Bioinformatics

Fig. 4

From: PARRoT- a homology-based strategy to quantify and compare RNA-sequencing from non-model organisms

Fig. 4

Cumulative expression level for GO terms. a Users can select different level for GO terms. PARRoT includes pre-computed tree structure for GO terms and users can selection the level from the dropdown list. Once the level is changed, both the plot and table will change with new data corresponding to whatever the level users select. b Number of virtual transcripts belong to the GO terms. c Number of raw counts mapped to the virtual transcripts belonging to the GO terms. d Sum up of all estimated RPKM (eRPKM) for virtual transcripts belonging to the GO terms. e Sum up of all estimated TPM (eTPM) for virtual transcripts belonging to the GO terms

Back to article page