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Fig. 4 | BMC Bioinformatics

Fig. 4

From: The role of nucleotide composition in premature termination codon recognition

Fig. 4

The magnitude A − 0.5, where A is the effect size of all non-binary features in the non-redundant feature set. Red depicts features with effect size A − 0.5 ≥ 0.1, blue depicts features with effect size A − 0.5 ≤ − 0.1, and green depicts features with effect size − 0.1 < A − 0.5 < 0.1. a Full validation set of 171 ECJ-independent NMD-targets compared to NMD-insensitive transcripts. b Validation set of 51 EJC-independent NMD-targets that are also up-regulated upon SMG6/UPF1 knockout compared to NMD-insensitive transcripts

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