Table 1 Performance of recurrent mutation prediction: Raw recurrence model
From: Predicting the recurrence of noncoding regulatory mutations in cancer
Recurrence window | Raw recurrence threshold | Size of true set | Average AUC | Randomized AUC |
|---|---|---|---|---|
20 bp | ≥2 | 4473 | 0.57 | 0.50 |
≥3 | 866 | 0.64 | 0.50 | |
≥4 | 216 | 0.73 | 0.51 | |
≥5 | 94 | 0.74 | 0.47 | |
10 bp | ≥2 | 2795 | 0.58 | 0.50 |
≥3 | 466 | 0.67 | 0.50 | |
≥4 | 114 | 0.75 | 0.50 | |
≥5 | 43 | 0.77 | 0.52 | |
5 bp | ≥2 | 1893 | 0.61 | 0.52 |
≥3 | 292 | 0.68 | 0.47 | |
≥4 | 61 | 0.78 | 0.58 | |
≥5 | 21 | 0.65 | 0.51 |