Fig. 3

Compares the true DEFs detected by different DC configurations. Four DC configurations (DC^T, DC^R, DC^NB and DC^T+R+NB) are compared under different sample sizes (x-axis) and different true DEF configurations: (a) G ⁴⁰⁰₄₀₀ , (b) G ⁵⁰⁰₅₀₀ , (c) G ⁶⁰⁰₆₀₀ , and (d) G ¹⁰⁰⁰₀ . The target FDR cutoff is 0.05. The y-axis indicates the relative differences (in parentage) of the average true DEFs detected by different DC configurations with respect to those detected by DC^T+R+NB.The plots only display up to 20% relative difference. This figure clearly shows that DC^T+R+NB outperformed the remaining DC configurations