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Table 3 The average number of aligned couples (i.e., |π|) and the average of share of nodes in LCSC (i.e., |L C S C|/|V 1|). We use α=0.7 for SPINAL, IsoRank, MAGNA and L-GRAAL, and r=1 for PROPER

From: PROPER: global protein interaction network alignment through percolation matching

Algorithms

|Ï€|

|L C S C|/|V 1|

PROPER (â„“=150)

5521.2

0.528

PROPER (â„“=600)

5320.5

0.728

SPINAL I

6364.3

0.219

SPINAL II

6433.4

0.720

PINALOG

3740.9

0.233

L-GRAAL

5616.4

0.726

MAGNA++(S 3)

6647.8

0.292

MAGNA++(EC)

6647.8

0.353

IsoRank

6647.8

0.051

  1. The best value for each column is highlighted in boldface