From: Gene regulatory network inference using PLS-based methods
Method | Complexity |
---|---|
GENIE3 | \( O\left( TKPN \log N\right),T=1000,\ K=\sqrt{P}. \) |
TIGRESS | O(TKPN), T = 1000, K = number of regulatory genes. |
CLR | O(P 2) |
ARACNE | O(P 3) |
NIMEFI | \( O\left( TKPN \log N\right),T=1000,\ K=\sqrt{P} \) |
PLSNET | \( O(TKPN),\ T=1000,K=\sqrt{P}. \) |