ConEVA: a toolbox for comprehensive assessment of protein contacts

BMC Bioinformatics

Table 2 Spearman’s rank correlation coefficient calculations of L, N_c, and various evaluation measures with TM-score of the best CONFOLD built model for various protein fold types. Top-L/5 PSICOV predicted contacts are evaluated

	α	α + β	α/β	β
L	−0.34	0.21	0.05	−0.13
N_c	−0.47	0.27	0.08	−0.14
Precision	0.33	0.67	0.38	0.85
Coverage	0.60	0.33	0.28	0.70
X_d	0.31	0.69	0.44	0.84
Mean false positive error	−0.48	−0.78	−0.63	−0.86
Spread	−0.48	0.02	−0.30	−0.29

ISSN: 1471-2105