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Table 2 Spearman’s rank correlation coefficient calculations of L, Nc, and various evaluation measures with TM-score of the best CONFOLD built model for various protein fold types. Top-L/5 PSICOV predicted contacts are evaluated

From: ConEVA: a toolbox for comprehensive assessment of protein contacts

  α α + β α/β β
L −0.34 0.21 0.05 −0.13
Nc −0.47 0.27 0.08 −0.14
Precision 0.33 0.67 0.38 0.85
Coverage 0.60 0.33 0.28 0.70
Xd 0.31 0.69 0.44 0.84
Mean false positive error −0.48 −0.78 −0.63 −0.86
Spread −0.48 0.02 −0.30 −0.29