Table 1 Assembly statistics

Number of concatenated transcripts

6

576,412

25,854

152,491

184,892

278,987

885,944

42,535

15,340

CDS number

7

139,727

22,180

112,813

81,598

137,601

379,596

37,920

41,103

uniCDS number^b

8

59,178 (58%)

9,942 (55%)

40,116 (64%)

27,735 (66%)

63,092 (54%)

131,656 (65%)

12,118 (68%)

14,890 (64%)

Total transcript number

9

58,185

9,744

39,022

26,968

61,798

127,526

11,582

14,283

Total CDS number

9

64,659

11,605

51,416

34,363

68,288

153,118

14,231

15,412

Transcripts with multiple CDSs^c

9

5,759 (10%)

1,529 (15%)

9,756 (19%)

5,838 (22%)

5,999 (10%)

21,060 (17%)

2,218 (19%)

949 (7%)

Redundant CDSs^d

9

5,481 (9%)

1,663 (14%)

11,300 (22%)

6,628 (19%)

5,196 (8%)

21,462 (14%)

2,113 (15%)

522 (3%)

Transcriptome size (bp)

9

131,591,076

16,164,888

69,689,679

69,421,322

86,181,833

206,036,224

34,121,269

19,765,122

Smallest transcript (bp)

9

300

300

300

300

300

300

300

300

Largest transcript (bp)

9

35,470

15,061

21,466

51,362

13,117

19,833

29,220

26,756

N50

9

3,483

2,414

2,366

3,866

1,823

2,116

4,479

1,666