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Table 7 Comparison of BLASTx annotation rate of both N. benthamiana cumulative transcriptomes

From: Combining independent de novo assemblies optimizes the coding transcriptome for nonconventional model eukaryotic organisms

 

Our study

Nakasugi et al

Total number of transcripts

127,526

234,526

Number of transcripts with BLASTx hits against Swiss-prot

95,929 (75%)

176,540 (75%)

Number of transcripts with a unique Swiss-prot hit

16,472

16,222

Number of shared transcripts with a unique Swiss-prot hit

13,938

Number unique transcripts with a unique Swiss-prot hit

2,534

2,284