From: TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas
Experiment type | # Aliquots | # Samples | # Patients | # Tumors |
---|---|---|---|---|
CNV | 22,632 | 22,409 | 11,162 | 33 |
DNA-seq | 6,914 | 6,884 | 6,852 | 30 |
DNA-methylation | 12,841 | 12,508 | 11,26 | 33 |
miRNA-seq | 9,909 | 9,763 | 9,031 | 32 |
RNA-seq V1 | 3,675 | 3,674 | 3,393 | 15 |
RNA-seq V2 | 9,825 | 9,823 | 9,107 | 31 |
All | 62,335 | 22,840 | 11,317 | 33 |