Skip to main content

Advertisement

Table 1 Number (#) of considered data for each type of experiment, across all TCGA tumors

From: TCGA2BED: extracting, extending, integrating, and querying The Cancer Genome Atlas

Experiment type # Aliquots # Samples # Patients # Tumors
CNV 22,632 22,409 11,162 33
DNA-seq 6,914 6,884 6,852 30
DNA-methylation 12,841 12,508 11,26 33
miRNA-seq 9,909 9,763 9,031 32
RNA-seq V1 3,675 3,674 3,393 15
RNA-seq V2 9,825 9,823 9,107 31
All 62,335 22,840 11,317 33