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Fig. 1 | BMC Bioinformatics

Fig. 1

From: An internet-based bioinformatics toolkit for plant biosecurity diagnosis and surveillance of viruses and viroids

Fig. 1

Workflow for the bioinformatics VSD toolkit for the discovery of viruses and viroids. Three versions of the workflow are available, with users able to choose from three options of read lengths (21–25 nt, 21–22 nt, or 24 nt length reads, ‘Extract read lengths’ tool). ★ indicates tools where users may change options or parameters as desired. ✚ indicates tools and workflows users can add or remove to the pipeline as by default these are not part of the automated VSD pipeline. ★ ✚ both ★ and ✚ options are available to users. *Results from this optional step are not used in downstream analyses

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BMC Bioinformatics

ISSN: 1471-2105

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