Skip to main content

Table 1 Characters per gene partition for each mtDNA data set

From: Visualizing phylogenetic tree landscapes

Gene Fishes Mammals Salamanders Test
ATP8 939(156) 362(164) 783(162) 768
ND4L 1362(285) 1056(290) 378(279) 271
ND3 690(339) 1559(347) 355(330) 236
COII 444(690) 433(682) 196(681) 121
ATP6 415(657) 540(708) 156(681) 111
COIII 643(783) 554(786) 149(783) 114
12S 256(693) 219(787) 119(809) 107
ND1 507(933) 170(969) 111(957) 107
ND2 371(990) 129(1048) 111(1014) 105
CytB 235(1164) 195(11 s40) 122(1131) 107
16S 205(922) 146(1199) 106(1260) 103
tRNAs 162(1152) 146(1339) 108(1274) 101
ND4 219(1371) 150(1384) 108(1332) 104
COI 386(1539) 228(1542) 106(1548) 102
ND5 188(1632) 114(1801) 103(1734) 102
Total Trees 7022(13,306) 6001(14,186) 3011(13,975) 2559
  1. The number of unique ML bootstrap topologies (100 replicates, GTR + Γ) retained for each of the 15-mtDNA gene partitions for each of the three- mtDNA alignments. The number of nucleotides representing each gene partition is given in parentheses. Gene partitions are sorted in ascending order of their size. Characters for each test partition are selected at random but in proportion to the size of each partition from the original salamander alignment