Table 1 Tools capability comparison
ATGC | Tripal | ||
|---|---|---|---|
Complete software installation | ✓✓✓ | ✓ | |
Access to personalize whole application | ✓ | ✓✓ | |
Access control for external (non-administrative) users | ✓✓ | ✓✓✓ | |
Out of the box ready querying of ontology terms (GO, SO) in database | ✓✓✓ | ✓ | |
Expression data integrated in schema (ready-to-use) | ✓✓✓ | Ni | |
Functional Annotation Loading | Blast2Go (annot files) | ✓✓✓ | ✓ |
InterProScan (raw or xml files) | ✓✓✓ | ✓✓✓ | |
Kegg Pathways (KAAS output files) | Ni | ✓✓✓ | |