Fig. 4
From: Combining phylogenetic footprinting with motif models incorporating intra-motif dependencies
Classification performance averaged for all 35 TFs. a We show the ROC AUC for PFMs of orders 0, 1, and 2 in percent averaged over 25–fold stratified repeated random subsampling and averaged over all 35 TFs. The overall classification performance increases with the order of the PFM. b We show the improvement of the ROC AUC for the PFMs of orders 1 and 2 relative to the PFM of order 0 averaged over 25–fold stratified repeated random subsampling and averaged over all 35 TFs