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Table 1 Characteristics of GD108 proteins and the corresponding number of host proteins targeted by motifs

From: Prediction of GCRV virus-host protein interactome based on structural motif-domain interactions

Genome segment

Segment name

Uniprot accession no.

Genome length (bp)

Protein length (aa)

Number of PPI

Predicted function

L1

VP1

E7DDK3

3,928

1,294

910

Guanylyl transferase/Capping Enzyme

L2

VP2

E7DDK4

3,867

1,273

949

RNA-dependent RNA polymerase

L3

VP3

E7DDK5

3,752

1,232

636

NTPase/helicase

M4

NS1

E7DDK6

2,263

716

910

Non-structural, possibly involved in the formation of viral inclusion body

M5

VP5

E7DDK7

2,230

726

765

Inner capsid protein

M6

VP4

E7DDL3

2,028

650

1083

Major outer capsid protein

S7

Sigma1-like protein

E7DDK8

1,604

512

854

Minor capsid cell attachment protein, possibly

S8

Unknown

E7DDK9

1,563

361

16

Major inner capsid protein

S9

VP6

E7DDL0

1,320

418

435

Non-structural, possibly invplved in the formation of viral inclusion bodies

S10

Sigma NS-like protein

E7BY76

1,124

354

573

Non-structural, possibly

S11

Unknown

E7DDL2

1,027

310

389

Non-structural protein

  1. The seventh column represents the number of host proteins whose domains were predicted to interact with motifs of the corresponding virus protein