Table 3 Overview over all algorithms compared
From: DISMS2: A flexible algorithm for direct proteome- wide distance calculation of LC-MS/MS runs
Name | Search | Spectrum | Annotation | Filter | Duplicates |
|---|---|---|---|---|---|
method | universe | check | check | ||
DB.ra | Database | Reduced | Yes | No | Kept |
DB.ra.nodup | Database | Reduced | Yes | No | Removed |
DISMS2.f | Distance | All | No | Yes | Kept |
DB.a | Database | All | Yes | No | Kept |
DISMS2.af | Distance | All | Yes | Yes | Kept |
DB.af | Database | All | Yes | Yes | Kept |