Skip to main content

Table 3 Sequential analysis of deviance (anova): it sequentially compares the smaller model with the next more complex model by adding one variable (TS) in each step

From: In silico prediction of lncRNA function using tissue specific and evolutionary conserved expression

Predictor Df Deviance Resid. Df Resid. Dev Pr(>Chi)
All tissues 1 5534.7 23920 24919 < 2.2e-16***
Pancreas 1 1694.8 23919 23224 < 2.2e-16***
Muscle 1 617.6 23918 22606 < 2.2e-16 ***
Kidney 1 131.7 23917 22475 < 2.2e-16***
Adipose Tissue 1 208.0 23916 22267 < 2.2e-16***
Heart 1 124.2 23915 22142 < 2.2e-16***
Skin 1 79.4 23914 22063 < 2.2e-16***
Salivary Gland 1 27.6 23913 22035 1.476e-07***
Adrenal Gland 1 54.2 23912 21981 1.844e-13***
Liver 1 38.0 23911 21943 7.127e-10 ***
Testis 1 18.6 23910 21925 1.582e-05***
Blood 1 35.0 23909 21890 3.280e-09***
Brain 1 14.5 23908 21875 0.0001425***
Lung 1 12.6 23907 21862 0.0003821***
Esophagus 1 19.8 23906 21843 8.546e-06***
Colon 1 12.9 23905 21830 0.0003299***
Stomach 1 5.5 23904 21824 0.0185580*
Thyroid 1 3.2 23903 21821 0.0756208.
Cervix Uteri 1 2.0 23902 21819 0.1569939
Blood Vessel 1 2.1 23901 21817 0.1460208
Vagina 1 1.2 23900 21816 0.2668693
Nerve 1 1.0 23899 21815 0.3103205
Pituitary 1 1.0 23898 21814 0.3151511
Ovary 1 0.6 23897 21813 0.4379597
Bladder 1 0.3 23896 21813 0.5573609
Uterus 1 0.3 23895 21812 0.5560578
Prostate 1 0.2 23894 21812 0.6973397
Spleen 1 0.1 23893 21812 0.7249901
Small Intestine 1 0.1 23892 21812 0.7569913
Breast 1 0.1 23891 21812 0.7576411
Fallopian Tube 1 0.0 23890 21812 0.9245252
  1. Each of those comparisons is done via a likelihood ratio test. The model does not significantly improve after the inclusion of the best 17 TS as predictors (Signif. codes: 0 ‘***’ 0.001 ‘*’ 0.05 ‘.’ 0.1 ‘ ’1)