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Table 3 Sequential analysis of deviance (anova): it sequentially compares the smaller model with the next more complex model by adding one variable (TS) in each step

From: In silico prediction of lncRNA function using tissue specific and evolutionary conserved expression

Predictor

Df

Deviance

Resid. Df

Resid. Dev

Pr(>Chi)

All tissues

1

5534.7

23920

24919

< 2.2e-16***

Pancreas

1

1694.8

23919

23224

< 2.2e-16***

Muscle

1

617.6

23918

22606

< 2.2e-16 ***

Kidney

1

131.7

23917

22475

< 2.2e-16***

Adipose Tissue

1

208.0

23916

22267

< 2.2e-16***

Heart

1

124.2

23915

22142

< 2.2e-16***

Skin

1

79.4

23914

22063

< 2.2e-16***

Salivary Gland

1

27.6

23913

22035

1.476e-07***

Adrenal Gland

1

54.2

23912

21981

1.844e-13***

Liver

1

38.0

23911

21943

7.127e-10 ***

Testis

1

18.6

23910

21925

1.582e-05***

Blood

1

35.0

23909

21890

3.280e-09***

Brain

1

14.5

23908

21875

0.0001425***

Lung

1

12.6

23907

21862

0.0003821***

Esophagus

1

19.8

23906

21843

8.546e-06***

Colon

1

12.9

23905

21830

0.0003299***

Stomach

1

5.5

23904

21824

0.0185580*

Thyroid

1

3.2

23903

21821

0.0756208.

Cervix Uteri

1

2.0

23902

21819

0.1569939

Blood Vessel

1

2.1

23901

21817

0.1460208

Vagina

1

1.2

23900

21816

0.2668693

Nerve

1

1.0

23899

21815

0.3103205

Pituitary

1

1.0

23898

21814

0.3151511

Ovary

1

0.6

23897

21813

0.4379597

Bladder

1

0.3

23896

21813

0.5573609

Uterus

1

0.3

23895

21812

0.5560578

Prostate

1

0.2

23894

21812

0.6973397

Spleen

1

0.1

23893

21812

0.7249901

Small Intestine

1

0.1

23892

21812

0.7569913

Breast

1

0.1

23891

21812

0.7576411

Fallopian Tube

1

0.0

23890

21812

0.9245252

  1. Each of those comparisons is done via a likelihood ratio test. The model does not significantly improve after the inclusion of the best 17 TS as predictors (Signif. codes: 0 ‘***’ 0.001 ‘*’ 0.05 ‘.’ 0.1 ‘ ’1)