TV N (%) | FV N (%) | Variant selected by hard filtering % | |
---|---|---|---|
HC dataset | |||
Homo SNVs | |||
Overall | 2,382 (66.6) | 1,195 (33.4) | 93.9 |
Selected | 2,238 (98.6) | 31 (1.3) | |
Het SNVs | |||
Overall | 87,361 (99.8) | 177 (0.2) | 98.6 |
Selected | 86,166 (99.9) | 24 (0.03) | |
Homo indels | |||
Overall | 54 (0.12) | 43,871 (99.8) | 27.7 |
Selected | 15 (75) | 5 (25) | |
Het indels | |||
Overall | 17.305 (45.8) | 20,410 (54.1) | 84.6 |
Selected | 14,646 (94) | 935 (6) | |
LC dataset | |||
Homo SNVs | |||
Overall | 2,084 (12.38) | 14,721 (87.6) | 96.9 |
Selected | 2,020 (92.2) | 171 (7.8) | |
Het SNVs | |||
Overall | 95,119 (97.6) | 2,322 (2.3) | 99.4 |
Selected | 94,602 (99.9) | 80 (0.08) | |
Homo indels | |||
Overall | 154 (0.4) | 45623 (99.6) | 100 |
Selected | 154 (0.4) | 45623 (99.6) | |
Het indels | |||
Overall | 7,502 (17.6) | 34,889 (82.3) | 43 |
Selected | 3,226 (99.1) | 27 (0.8) |