Table 1 Simulation setup summary
From: Model based heritability scores for high-throughput sequencing data
Simulation | (ϕ,α) or (p,ϕ,α) | σ 2 | (G,S,R s ) |
|---|---|---|---|
I. Parameter effects | Constant for all features | Random samples from Unif\((0, \sigma ^{2}_{\max })\), where \(\sigma ^{2}_{\max }\) = 1 or 5 | (1000, 50, 6) |
II. Exhaustive combo of parameters | Ind. combo of parameters for every feature | Random samples from Unif (0,5) | (1000, 50, 3) |
III. Observed combo of parameters | Estimated from the LXS miRNA dataset | (881, 59, 2 or 3) | |
IV. Size & power | Estimated from the LXS miRNA dataset | 0,0.1,0.25,0.5,0.75 or 1 | (1000, 50, 3) |
V. Confidence intervals | Specifically chosen to generate heritability scores 0.2, 0.5 and 0.8 | (500, 50, 3) | |