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Fig. 3 | BMC Bioinformatics

Fig. 3

From: Manananggal - a novel viewer for alternative splicing events

Fig. 3

Overview of the Manananggal user interface. a Project specific selections, e.g. what condition type should be used for grouping samples. b options that affect the visual output shown in g and h, also includes a link to the user manual. c Specific samples can be selected here. d Colors for each condition can be defined here. e Isoforms may be selected here. f Additional options that affect the visual output and detection of alternatively spliced exons. Also includes a button to create a HTML link to the current view. g Coverage plots that by default show one coverage line per condition. h The isoform plot indicates overlapping transcripts in sense and antisense direction, highlights potential exon skipping events and shows each of the selected isoforms. Please note that the image is not showing the complete Manananggal interface. A multi-column table of alternative splicing candidates is located in the top right corner of the web interface that we omitted for reasons of clarity

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