Skip to main content
Fig. 2 | BMC Bioinformatics

Fig. 2

From: Exploring the transcriptome of non-model oleaginous microalga Dunaliella tertiolecta through high-throughput sequencing and high performance computing

Fig. 2

Speedup achieved by mpiBLASTX calculated over run of 24 cores. It shows the scalability test based on the subsampling from the four sources of datasets, where we increased the number of cores in the system for mpiBLASTX application from 24 (1 node) to 1680 (70 nodes) cores and measured the speedup achieved. It was concluded that using 960 (40 nodes) cores was optimal regarding the time cost in this study

Back to article page

BMC Bioinformatics

ISSN: 1471-2105

Contact us