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Table 2 Transcriptome assembly and annotation descriptions of different species

From: Exploring the transcriptome of non-model oleaginous microalga Dunaliella tertiolecta through high-throughput sequencing and high performance computing

 

C. reinhardtii v5.5

V. carteri v2.1

D. salina v1.0

D. tertiolecta Shin et al.

Dt_v11/Dt_v11.2

Genome description

111.1 Mb arranged on 17 chromosomes and 37 minor scaffolds

131.2 Mb arranged in 434 scaffolds

343.7 Mb arranged in 5512 scaffolds

-

-

N50 (bp)

3938

4188

2291

1540

1797

Maximum contig length (bp)

72,700

24,197

17,353

15,234

16,518

Total size of contigs (bp)

63,797,006

51,775,597

33,246,103

16,600,538

24,538,468

Protein-coding transcripts

19,526

16,075

18,801

13,861

-

transcript_primaryTranscriptOnly

17,741

14,247

16,697

9839

17,845 / 15,336

Average length (bp)

3267

3220

1768

1197

1375

Alternatively spliced transcripts

1785

1828

2104

-

-

  1. The entry in italic represents data from Dt_v11.2