From: String kernels for protein sequence comparisons: improved fold recognition
 | Distance |  | |||
---|---|---|---|---|---|
CATH fold ID | N a | FASTA b | STRUCTAL c | SeKernel(0.2,10) d | SeqKernel(0.0001,2) e |
1.10.10 | 381 | 0.58 | 0.85 | 0.31 | 0.62 |
2.60.40 | 555 | 0.58 | 0.97 | 0.38 | 0.65 |
3.20.20 | 251 | 0.53 | 0.99 | 0.88 | 0.85 |
3.30.70 | 368 | 0.53 | 0.92 | 0.33 | 0.62 |
3.40.50 | 1278 | 0.53 | 0.92 | 0.77 | 0.77 |
All five folds | 2833 | 0.54 | 0.93 | 0.69 | 0.76 |