Table 1 Amino acid (AA) relative frequency (%) and conservation index (CI)
IM | TM | M | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AA | N | % | CI | tM | D | N | % | CI | tM | D | N | % | CI | tM | D |
A | 37 | 5.1 | 50.4 | 37 | 0 | 192 | 8.3 | 57.4 | 177 | 7 | 26 | 3.5 | 44.6 | 27 | 1 |
C | 3 | 0.4 | 67.4 | 1 | 0 | 14 | 0.6 | 59.2 | 8 | 0 | 5 | 0.7 | 64.5 | 4 | 0 |
D | 28 | 3.8 | 73.2 | 25 | 0 | 21 | 0.9 | 69.8 | 9 | 2 | 17 | 2.3 | 72.4 | 16 | 0 |
E | 18 | 2.5 | 57.5 | 7 | 0 | 42 | 1.8 | 78.4 | 23 | 2 | 28 | 3.8 | 71.0 | 15 | 2 |
F | 30 | 4.1 | 60.7 | 22 | 0 | 154 | 6.7 | 69.5 | 104 | 1 | 32 | 4.3 | 58.3 | 18 | 1 |
G | 46 | 6.3 | 73.9 | 25 | 0 | 128 | 5.5 | 80.8 | 60 | 4 | 38 | 5.1 | 77.0 | 15 | 0 |
H | 18 | 2.5 | 64.6 | 12 | 0 | 51 | 2.2 | 74.0 | 22 | 1 | 28 | 3.8 | 55.9 | 26 | 0 |
I | 45 | 6.2 | 44.4 | 44 | 0 | 234 | 10.1 | 46.0 | 318 | 0 | 40 | 5.4 | 35.5 | 55 | 0 |
K | 11 | 1.5 | 58.2 | 1 | 0 | 39 | 1.7 | 66.2 | 9 | 0 | 45 | 6.0 | 45.3 | 17 | 0 |
L | 98 | 13.4 | 50.1 | 44 | 1 | 457 | 19.7 | 60.4 | 205 | 12 | 89 | 11.9 | 49.0 | 46 | 1 |
M | 31 | 4.3 | 52.5 | 20 | 2 | 140 | 6.1 | 38.9 | 134 | 3 | 37 | 5.0 | 34.1 | 36 | 0 |
N | 49 | 6.7 | 48.4 | 49 | 0 | 65 | 2.8 | 47.7 | 59 | 0 | 50 | 6.7 | 44.0 | 70 | 0 |
P | 61 | 8.4 | 70.9 | 31 | 0 | 90 | 3.9 | 65.1 | 41 | 2 | 68 | 9.1 | 65.2 | 41 | 0 |
Q | 24 | 3.3 | 55.9 | 8 | 0 | 35 | 1.5 | 63.2 | 11 | 1 | 31 | 4.2 | 54.1 | 20 | 0 |
R | 10 | 1.4 | 86.6 | 2 | 0 | 33 | 1.4 | 80.5 | 14 | 1 | 20 | 2.7 | 82.6 | 13 | 3 |
S | 58 | 8.0 | 39.6 | 55 | 0 | 159 | 6.9 | 53.1 | 117 | 2 | 57 | 7.6 | 42.2 | 61 | 2 |
T | 82 | 11.2 | 36.3 | 73 | 0 | 207 | 8.9 | 40.6 | 201 | 0 | 62 | 8.3 | 33.4 | 79 | 0 |
V | 33 | 4.5 | 49.7 | 32 | 0 | 114 | 4.9 | 50.7 | 147 | 3 | 20 | 2.7 | 42.0 | 18 | 0 |
W | 20 | 2.7 | 89.0 | 1 | 0 | 64 | 2.8 | 79.9 | 19 | 1 | 20 | 2.7 | 71.5 | 7 | 0 |
Y | 27 | 3.7 | 67.1 | 17 | 1 | 75 | 3.2 | 64.9 | 36 | 0 | 33 | 4.4 | 43.2 | 31 | 1 |
729 | 506 | 4 | 2314 | 1714 | 42 | 746 | 615 | 11 | |||||||