Table 1 Summary of 100 runs of SeqCNV on simulation data. Boundary (Start/End) is the average distance to the nearest starting (ending) point of the detected variants
Type | One copy gain | One copy loss | ||||||
|---|---|---|---|---|---|---|---|---|
Resolution | 1Â MB | 100Â KB | 10Â KB | 1Â KB | 1Â MB | 100Â KB | 10Â KB | 1Â KB |
Sensitivity | 99.50% | 99.00% | 75.00% | 67.80% | 99.00% | 96.50% | 91.00% | 66.80% |
Boundary (Start) | 1.69Â KB | 1.37Â KB | 0.73Â KB | 0.29Â KB | 0.71Â KB | 0.64Â KB | 0.49Â KB | 0.18Â KB |
Boundary (End) | 1.28Â KB | 1.01Â KB | 0.91Â KB | 0.32Â KB | 0.91Â KB | 0.71Â KB | 0.72Â KB | 0.21Â KB |
False Positive Rate | 0% | 0% | 0% | 0% | 0% | 0% | 0% | 3.74% |