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Table 3 The effect of sample source bias on dataset GSE19728

From: Avoiding the pitfalls of gene set enrichment analysis with SetRank

 

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1

regulation of synaptic transmission (GO:0050804)

neurotransmitter transport (GO:0006836)

regulation of synaptic plasticity (GO:0048167)

2

neuron-neuron synaptic transmission (GO:0007270)

regulation of exocytosis (GO:0017157)

pallium development (GO:0021543)

3

regulation of Rho protein signal transduction (GO:0035023)

regulation of transporter activity (GO:0032409)

telencephalon development (GO:0021537)

4

establishment of vesicle localization (GO:0051650)

membrane depolarization (GO:0051899)

positive regulation of cell development (GO:0010720)

5

synaptic vesicle transport (GO:0048489)

regulation of ion transmembrane transporter activity (GO:0032412)

membrane depolarization (GO:0051899)

6

positive regulation of cell development (GO:0010720)

positive regulation of cell development (GO:0010720)

establishment of organelle localization (GO:0051656)

7

regulation of postsynaptic membrane potential (GO:0060078)

establishment of vesicle localization (GO:0051650)

regulation of Rho GTPase activity (GO:0032319)

8

regulation of Rho GTPase activity (GO:0032319)

positive regulation of cell projection organization (GO:0031346)

synapse organization (GO:0050808)

9

regulation of neuron apoptotic process (GO:0043523)

peptidyl-serine phosphorylation (GO:0018105)

vesicle localization (GO:0051648)

10

membrane depolarization (GO:0051899)

regulation of peptide secretion (GO:0002791)

establishment of vesicle localization (GO:0051650)

  1. Brain-specific GO terms are marked in italic.