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Fig. 5 | BMC Bioinformatics

Fig. 5

From: SAG-QC: quality control of single amplified genome information by subtracting non-target sequences based on sequence compositions

Fig. 5

Inference of highly confident region on scatterplot using non-target sequence. a Scatterplot based on sequence composition. b Heat map showing density of the plots. The densities were calculated by Gaussian kernal distribution estimation. c Sample sequences were composed of two constitutions target sequences and contaminating sequences. The distribution of target sequences ideally can be estimated by subtracting the distribution of non-target sequences. d Estimated distribution of target sequence. e Example of confidence map. The map shows confidence, an indicator reflecting whether a sequence was derived from a target sequence. Users can extract highly confident regions based on this information

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BMC Bioinformatics

ISSN: 1471-2105

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